Melanoma is a leading fatal illness responsible for 80% of deaths from skin cancer. It originates in the pigment-producing melanocytes in the basal layer of the epidermis. Melanocytes produce the melanin, (the dark pigment), which is responsible for the color of skin. As all cancers, melanoma is caused by damage to the DNA of the cells, which causes the cell to grow out of control, leading to a tumor, which is much more dangerous, if it cannot be found or detected early. Only biopsy can determine exact malformation diagnose, though it can rise metastasizing. When a melanoma is suspected, the usual standard procedure is to perform a biopsy and to subsequently analyze the suspicious tissue under the microscope. In this Paper, we provide a new approach using methods known as "Imaging Spectroscopy" or "Spectral Imaging" for early detection of melanoma. Spectral imaging can fill this gap of the classical imaging, which carries little spectral information while spectroscopy is severely limited in terms of measuring (potentially) inhomogeneous samples. Three different classifiers were applied, Maximum Likelihood ML and Spectral Angle Mapper SAM and K-Means. SAM rests on the spectral "angular distances" and the conventional classifier ML rests on the spectral distance concept. SAM and ML are two methods of the supported classification routines and K-Means is the known unsupported classification (clustering) algorithm.
Published in |
American Journal of Biomedical and Life Sciences (Volume 3, Issue 2-3)
This article belongs to the Special Issue Spectral Imaging for Medical Diagnosis “Modern Tool for Molecular Imaging” |
DOI | 10.11648/j.ajbls.s.2015030203.12 |
Page(s) | 8-15 |
Creative Commons |
This is an Open Access article, distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium or format, provided the original work is properly cited. |
Copyright |
Copyright © The Author(s), 2015. Published by Science Publishing Group |
Melanoma; Spectral imaging; spectral spectroscopy; Maximum Likelihood; Spectral Angle Mapper, classification, K-Means clustering, Supported classification, unsupported classification, cancer detection
[1] | I. Ibraheem, R. Leitner, H. Mairer, L. Cerroni and, J. Smolle, Hyperspectral analysis of stained histological preparations for the detection of melanoma. Proceeding of third International Workshop on Spectral Imaging, Graz, 13 May 2006. |
[2] | I. Ibraheem, Novel approach for the automated detection of allergy test using spectral imaging, J. Biomedical Science and Engineering, 2012, 5, 416-421 |
[3] | R. Leitner, I. Ibraheem, A. Kercek, Proc. 2nd International Workshop on Spectral Imaging (2005) |
[4] | I. Ibraheem Linear and quadratic classifier to detection of skin lesions “epicutaneus”. Fifth International Conference on Bioinformatics and Biomedical Engineering, Wuhan, 31 May 2011, 1-5. |
[5] | C. M. Bishop, Pattern Recognition and Machine Learning, Springer; Auflage: first ed. 2006. Corr. 2nd printing 2011 (2007) |
[6] | R.O.Duda, P.E.Hart and D.G. Strock, Pattern Classification, John Wiley & Sons; Auflage: 2. Auflage (21. November 2000) |
[7] | T.M. Lillesand, R.W. Kiefer and J.W. Chipman, Remote Sensing and Image Interpretation, John Wiley & Sons, Hoboken, NJ, USA, 2004. |
[8] | R. Bhargava, I. Levin (Eds.) Spectrochemical Analysis Using Infrared Multichannel Detectors, Blackwell Publishing (2005) |
[9] | E. Fix and J.L. Hodges, (1989) Discriminatory analysis, nonparametric discrimination: Consistency proper-ties. International Statistical Review, 57, 238-247. |
[10] | N. Eisenreich, T. Rohe in Encyclopedia of Analytical Chemistry, 7623 – 7644, Wiley & Sons (2000) |
[11] | Zenzo, S.D., R. Bernstein, S.D. Degloria and H.C. Kolsky (1987b), "Gaussian maximum likelihood and contextua1 classification algorithms for multicrop |
[12] | Du, Q. (2000), Topics in Hyperspectral Image Analysis, Department of Computer Science and Electrical Engineering, University of Matyland, Baltimore County,MD, May 2000. |
[13] | Du, Q. and C.-1 Chang (1998), "Radial basis function neural networks approach tohyperspectral image classification," 1998 Conference an Information Science andSystems, Princeton University, Princeton, NJ, pp. 721-726, March 1998. |
[14] | Du, Q. and C.-I Chang (1999), "An interference rejection-based radial basis function neural network approach to hyperspectral image classification," International JointConference on Neural Network, Washington DC, pp. 2698-2703, July 1999. |
[15] | Du, Q. and C.-1 Chang (2000), "A hidden Markov model-based spectral measure for hyperspectral image analysis," SPIE Conf Algorithms for Multispectral, Hyperspectral, and Ultraspectral Imagery VI, Orlando, FL, pp. 375-385, April 2000. |
[16] | Du, Q. and C.-1 Chang (2001a), "A linear constrained distance-based discriminantanalysis for hyperspectral image classification," Pattern Recognition, vol. 34, no. 2, 2001. |
[17] | Du, Q. and C.-1 Chang (2001b), "An interference subspace projection approach tosubpixel target detection," SPIE Conf an Algorithms for Multispectral,Hyperspectral and Ultraspectral Imagery VII, Orlando, Florida, pp. 570-577, 20- 24 April, 200 I. |
[18] | Du, Q. and H. Ren (2002), "On relationship between OSP and CEM," SPIE Conf. anAlgorithms for Multispectral, Hyperspectral and Ultraspectral Imagery VIII,Orlando, Florida, 20-24 April, 2002. |
[19] | Du, Q., C.-1 Chang, D.C. Heinz, M. L.G. Althause and I.W. Ginsberg (2000), "Hyperspectral image compression for target detection and classification," IEEE 2000 International Geoscience and Remote Sensing Symp., Hawaii, USA, July 24- 28, 2000. |
[20] | Fano, R.M. (1961), Transmission of Information: A Statistical Theory of Communication, John Wiley & Sons, N.Y., 1961. |
[21] | Farrand, W., and J.C. Harsanyi (1997), "Mapping the distribution of mine tailing in the coeur d'Alene river valley, Idaho, through the use of constrained energy minimization technique," Remote Sensing of Environment, vol. 59, pp. 64-76,1997. |
[22] | Friedman, J.H. and J.W. Tukey (1974), "A projection pursuit algorithm for exploratotydata analysis," IEEE Transactions an Computers, vol. c-23, no. 9, pp. 881-889,1974. |
[23] | Friedman, J.H. (1987) "Exploratoty projection pursuit," Journal of American Statistical Association, 82, pp. 249-266, 1987. |
[24] | Frost Ill, O.L. (1972), "An algorithm for linearly constrained adaptive array processing," Proc. IEEE, vol. 60, pp. 926-935, 1972. |
[25] | Fukunaga, K. (1982), "Intrinsic Dimensionality Extraction", Classification, Pattern Recognition and Reduction of Dimensionality, Handbock of Statistics, vol. 2, P .R. |
[26] | Krishnaiah and L.N. Kanal eds., Amsterdam: North-Holland Publishing Company,1982, pp. 347-360. |
[27] | Fukunaga, K (1992), Statistical Pattern Recognition, 2nd ed., New York: Academic Press, 1992. |
[28] | Pa!, N.R. and S. K. Pa! (1989), "Entropie thresholding," Signal Processing, Vol. 16,pp. 97-108, 1989. |
[29] | Poor, H.V. (1994), An Introduction to Detection and Estimation Theory, 2nd. ed., NewYork: Springer-Verlag, pp. 58-59, 1994. |
[30] | Rabiner, L. and B.-H. Juang (1993), Fundamentals ofSpeech Recognition, Prentice-Hall,1993. |
[31] | Reed, I.S. and X. Yu (1990), "Adaptive multiple-band CFAR detection of an optical pattern with unknown spectral distribution," IEEE Trans. on Acoustic, Speech andSignal Process., vol. 38, no. 10, pp. 1760-1770, Oct. 1990. |
[32] | Resmini, R.S., M.E. Kappus, W.S. Aldrich, J.C. Harsanyi and M. Anderson (1997), "Mineral mapping with HYperspectral Digital lmagery Collection Experiment (HYDICE) sensor data at Cuprite, Nevada, U.S.A.," Int. J. Remote Sensing, vol.18, no. 17, pp. 1553-1570, 1997. |
[33] | Ren, H. (1998), A Comparative Study of Mixed Pixel Classification Versus Pure Pixel Classification for Multi/Hyperspectral Imagery, Department.of Computer Science and Electrical Engineering, University of Maryland, Baltimore County, MD, May 1998. |
[34] | Ren, H. (2000), Unsupervised and Generalized Orthogonal Subspace Projection andConstrained Energy Minimization for Target Detection and Classification inRemotely Sensed Imagery, Department of Computer Science and ElectricalEngineering, University ofMaryland, Baltimore County, MD, May 2000. |
[35] | Ren, H. and C.-1 Chang (1998), "A computer-aided detection and classification methodfor concealed targets in hyperspectral imagery," IEEE 1998 International Geoscience and Remote Sensing Symposium, Seattle, WA, pp. 1016-1018, July 5- 10, 1998. |
[36] | Ren, H. and C.-I Chang (1999), "A constrained least squares approach to hyperspectral image classification," 1999 Conference on Information Science and Systems, pp. 551-556, Johns Hopkins University, Baltimore, MD, March 17-19, 1999. |
[37] | Ren, H. and C.-I Chang (2000a), "A generalized orthogonal subspace projection approach to unsupervised multispectral image classification," IEEE Trans. on Geoscience and Remote Sensing, vol. 38, no. 6, pp. 2515-2528, November 2000. |
[38] | Ren, H. and C.-1 Chang (2000b), "Target-constrained interference-minimized approach to subpixel target detection for hyperspectralimagery," Optical Engineering, vol. 39, no. 12, pp. 3138-3145, December 2000. |
[39] | Richards, J.A. (1993), Remote Sensing Digital Image Analysis, 2nd ed. Springer Verlag, 1993. |
[40] | Rissanen, J. (1978), "Modeling by shortest data description," Automatica, vol. 14, pp. 465-471, 1978. |
[41] | Roger, R.E. (1996), "Principal components transform with simple, automatic noise adjustrnent," International Journal Remote Sensing, vol. 17, no. 14, pp. 2719- 40 2727, 1996. |
[42] | Roger, R.E. and J.F. Amold (1996), "Re1iably estimating the noise in AVIRIShyperspectral imagers," Int. J. Remote Sensing, vol. 17, no. 10, 1951-1962, 1996. |
[43] | Sabol, D.E., J.B. Adams and M.O. Smith (1992), "Quantitative sub-pixel spectral detection oftargets in multispectral images," J. Geophys. Research, 97, pp. 2659-2672, 1992. |
[44] | Sahoo, P.K., S. Soltani, A.K.C. Wong and Y.C. Chen (1988), "A survey ofthresholding techniques," Computer Vision, Graphics and Image Process.(CVGIP), vol. 41, pp. 233-260, 1988. |
[45] | Schalkoff, R. (1992), Pattern Recognition: Statistical, Structure and Neural Network,New York: John Wiley and Sons, 1992. |
[46] | Scharf, L.L. (1991), Statistical Signal Processing, MA: Addison-Wesley, 1991. |
[47] | Schowengerdt, R.A. (1997), Remote Sensing: Models and Methods for ImageProcessing, 2nd ed., Academic Press, 1997. |
[48] | Schwarz, G. (1978), "Estimating the dimension of a model," Ann. Stat., vol. 6, pp. 461- 464, 1978. |
[49] | Settle, J.J. (1996), "On the relationship between spectral unmixing and subspace projection," IEEE Trans on Geoscience and Remote Sensing, vol. 34, no. 4, pp. 1045-1046, July 1996. |
[50] | Settle, J.J. and N.A. Drake (1993), "Linear mixing and estimation of ground cover proportions," Int. J. Remote Sensing, vol. 14, no. 6, pp. 1159-1177, 1993. |
[51] | Shahshahani, B.M. and D.A. Landgrebe (1994), "The effect of unlabeled samples in reducing the small sample size problern and mitigating the Hugh phenomenon,"IEEE Trans. Geoscience and Remote Sensing, vol. 32, no. 5, pp. 1087-1095,September 1994. |
[52] | Shimabukuro, Y.E. (1987), Shade Images Derived from Linear Mixing Models of Multispectral Measurements of Forested Areas, Ph.D. dissertation, Department of Forestand Wood Science, Colorado State University, Fort Collins, 1987. |
[53] | Shimabukuro, Y.E. and J.A. Smith (1991), "The least-squares mixing models to generate fraction images derived from remote sensing multispectral data," IEEE Trans on Geoscience and Remote Sensing, vol. 29, pp. 16-20, 1991. |
[54] | Singer, R.B. and T.B. McCord (1979), "Mars: !arge scale mixing of bright and dark surface materials and implications for analysis of spectral reflectance," Proc. Lunar Planet. Sei. Conf 10th, pp. 1835-1848, 1979. |
[55] | Smith, M.O., J.B. Adams and D.E. Sabol (1994), "Spectral mixture analysis-new strategies for the analysis of multispectral data," Image Spectroscopy-a tool for Environmental Observations edited by J. Hili and J. Mergier, Brussels and Luxembourg, pp. 125-143, 1994. |
[56] | Smith, M.O., D.A. Roberts, J. Hili, W. Mehl, B. Hosgood, J. Verdebout, G. Schmuck, C. Koechler and J.B. Adams (1994), "A new approach to quantifying abundances of materials in multispectral images," Proc. IEEE Int. Geoscience and Remote Sensing Symposium'94, Pasadena, CA, pp. 2372-2374, 1994. |
[57] | Soltanian-Zadeh,H., J.P. Windham, D.J. Peck (1996), "Optimal linear transformation for MRl feature extraction," IEEE Trans. on Medical Imaging, vol. 15, pp. 749- 767, 1996. |
[58] | Stark, H. and J. Woods (1994), Probability, Random Processes, and Estimation for Engineers, 3rd ed., Prentice-Hall, 2002. |
[59] | Steams, S.D., B.E. Wilson and J.R. Peterson (1993), "Dimensionality reduction by optimal band selection for pixel classification of hyperspectral imagery," Applications of Digital Image Processing XVI, SPIE, vol. 2028, pp. 118-127, |
[60] | Zhao, X. (1996), Subspace Projection Approach to Multispectral!Hyperspectral Image Classification Using Linear Mixture Modeling, Master Thesis, Departrnent of Computer Seiences and Electrical Engineering, University of Maryland Baitimare County, MD, May 1996. |
APA Style
Issa Ibraheem. (2015). Maximum Likelihood and Spectral Angle Mapper and K-means algorithms used to detection of Melanoma. American Journal of Biomedical and Life Sciences, 3(2-3), 8-15. https://doi.org/10.11648/j.ajbls.s.2015030203.12
ACS Style
Issa Ibraheem. Maximum Likelihood and Spectral Angle Mapper and K-means algorithms used to detection of Melanoma. Am. J. Biomed. Life Sci. 2015, 3(2-3), 8-15. doi: 10.11648/j.ajbls.s.2015030203.12
@article{10.11648/j.ajbls.s.2015030203.12, author = {Issa Ibraheem}, title = {Maximum Likelihood and Spectral Angle Mapper and K-means algorithms used to detection of Melanoma}, journal = {American Journal of Biomedical and Life Sciences}, volume = {3}, number = {2-3}, pages = {8-15}, doi = {10.11648/j.ajbls.s.2015030203.12}, url = {https://doi.org/10.11648/j.ajbls.s.2015030203.12}, eprint = {https://article.sciencepublishinggroup.com/pdf/10.11648.j.ajbls.s.2015030203.12}, abstract = {Melanoma is a leading fatal illness responsible for 80% of deaths from skin cancer. It originates in the pigment-producing melanocytes in the basal layer of the epidermis. Melanocytes produce the melanin, (the dark pigment), which is responsible for the color of skin. As all cancers, melanoma is caused by damage to the DNA of the cells, which causes the cell to grow out of control, leading to a tumor, which is much more dangerous, if it cannot be found or detected early. Only biopsy can determine exact malformation diagnose, though it can rise metastasizing. When a melanoma is suspected, the usual standard procedure is to perform a biopsy and to subsequently analyze the suspicious tissue under the microscope. In this Paper, we provide a new approach using methods known as "Imaging Spectroscopy" or "Spectral Imaging" for early detection of melanoma. Spectral imaging can fill this gap of the classical imaging, which carries little spectral information while spectroscopy is severely limited in terms of measuring (potentially) inhomogeneous samples. Three different classifiers were applied, Maximum Likelihood ML and Spectral Angle Mapper SAM and K-Means. SAM rests on the spectral "angular distances" and the conventional classifier ML rests on the spectral distance concept. SAM and ML are two methods of the supported classification routines and K-Means is the known unsupported classification (clustering) algorithm.}, year = {2015} }
TY - JOUR T1 - Maximum Likelihood and Spectral Angle Mapper and K-means algorithms used to detection of Melanoma AU - Issa Ibraheem Y1 - 2015/08/07 PY - 2015 N1 - https://doi.org/10.11648/j.ajbls.s.2015030203.12 DO - 10.11648/j.ajbls.s.2015030203.12 T2 - American Journal of Biomedical and Life Sciences JF - American Journal of Biomedical and Life Sciences JO - American Journal of Biomedical and Life Sciences SP - 8 EP - 15 PB - Science Publishing Group SN - 2330-880X UR - https://doi.org/10.11648/j.ajbls.s.2015030203.12 AB - Melanoma is a leading fatal illness responsible for 80% of deaths from skin cancer. It originates in the pigment-producing melanocytes in the basal layer of the epidermis. Melanocytes produce the melanin, (the dark pigment), which is responsible for the color of skin. As all cancers, melanoma is caused by damage to the DNA of the cells, which causes the cell to grow out of control, leading to a tumor, which is much more dangerous, if it cannot be found or detected early. Only biopsy can determine exact malformation diagnose, though it can rise metastasizing. When a melanoma is suspected, the usual standard procedure is to perform a biopsy and to subsequently analyze the suspicious tissue under the microscope. In this Paper, we provide a new approach using methods known as "Imaging Spectroscopy" or "Spectral Imaging" for early detection of melanoma. Spectral imaging can fill this gap of the classical imaging, which carries little spectral information while spectroscopy is severely limited in terms of measuring (potentially) inhomogeneous samples. Three different classifiers were applied, Maximum Likelihood ML and Spectral Angle Mapper SAM and K-Means. SAM rests on the spectral "angular distances" and the conventional classifier ML rests on the spectral distance concept. SAM and ML are two methods of the supported classification routines and K-Means is the known unsupported classification (clustering) algorithm. VL - 3 IS - 2-3 ER -